
What are the types of bond orders? - Matter Modeling Stack Exchange
Laplacian Bond Order This method is an extension of the QTAIM (Quantum Theory of Atoms In Molecules) concept of using the Laplacian of the electron density $\nabla^2\rho$ to characterize …
How may I calculate the bond length between two atoms?
Apr 26, 2021 · Bond formation could be something like 1-P $_ {break}$. You could also run quantum calculations for all possible pairs (or higher order clusters) of atoms or hit the literature to look up …
Bond length from infrared spectra? - Matter Modeling Stack Exchange
Jul 26, 2020 · If you know the bond lengths of few such compounds, you can derive a very accurate linear correlation between the bond length and the frequency. So while you can't directly predict …
Lost atoms in LAMMPS - Matter Modeling Stack Exchange
Nov 1, 2022 · HI @Magic_Number, after running with more recorded timestep, I think the main reason is because the molecule pass through zlo and have atom deleted, as result, the bond connecting that …
Maximum bond length in Vesta - Matter Modeling Stack Exchange
Dec 30, 2022 · I need some cutoff radii to count bonds between different atoms in my system. When a .cif file is opened in Vesta, there are some default values of min and max bond lengths between two …
How to plot molecules with angles and bond lengths
Dec 27, 2021 · I want to make a plot like the one in the picture, with bond lengths on top and a second one with bond angles. Again, plotting the molecule, calculating the bond angles and lengths is easy.
What is the bond length of O2--? - Matter Modeling Stack Exchange
Jan 28, 2023 · The real bond length could be obtained by doing a CBS extrapolation using FCI-level calculations with aug-cc-pCV8Z and aug-cc-pCV9Z, then adding corrections for relativity, QED, Born …
density functional theory - How to calculate homolytic bond ...
May 25, 2020 · An experimental colleague asked me how hard it would be to calculate homolytic bond-dissociation energies for different phosphonates which are involved in a Hydrophosphination. The …
Interpreting electron localization function (ELF) results
This could be a ionic bond. In that case the ELF function value can be very low at the AIM bond-critical-point. Did you evaluate the local kinetic and potential energy densities at the bond critical point ? …
Simulating breaking bonds in molecular dynamics
Very short answer: No, classical molecular dynamics cannot break bonds. The potential you showed is the most common form of bond, the harmonic potential a.k.a. Hookes law. If you have ever broken a …